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Analysis Pipeline


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Selection criteria for significant gene list :
Significant genes are selected with a p value cut-off of 0.1. The resultant list was then sorted in a descending order of fold change value. From the sorted list, the top 100 genes were selected for pathway/network. If the gene list is less than 100, the entire gene list was taken for pathway/network analysis.

>>Total hits : 1 , Search term given : Graft AND vs. AND Host AND Disease

  Kidney transplant rejection expression profiling

GEO Description :
Analysis of kidney transplant rejection by expression profiling of kidney biopsies and peripheral blood lymphocytes from patients. Results identify expression profiles unique to rejection, dysfunction without rejection, and well-functioning transplants.
Organism : Homo sapiens
GEO-ID : GDS724

Compared Group :
normal donor Vs acute rejection
  • Number of Nodes in the Network : 58
  • Number of Nodes passing Cut-Off : 100
  • PValue Cut-Off : 4.23691381001845e-05
  • Fold Change Cut-Off : 2.28







DISCLAIMER:
The interactions, networks, list of genes/molecules or any other information presented here, is HYPOTHETICAL in nature and is based on information collected from public as well as other sources, and is analyzed by certain automated mining and analysis software workflows. Strandlife Science Pvt.Ltd. or the Editors of PathwayWorld offer this information with NO CLAIMS of accuracy and WARRANTIES of any kind, and DO NOT Accept liability or legal responsibility for losses allegedly caused by using this information.

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